euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

138 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1807 chr1 75192898 75192898 - unknown germline . no 248 CRYZ
srip3903 chr1 119553359 119553359 + unknown germline . no 248 .
srip4112 chr1 149308428 149308428 + unknown germline . no 248 LOC645262
srip5420 chr1 179575364 179575364 - unknown germline . no 248 TDRD5
srip7708 chr10 14310833 14310833 - unknown germline . no 248 FRMD4A
srip7850 chr10 19211098 19211098 . unknown germline . no 248 .
srip8458 chr10 25707693 25707693 - unknown germline . no 248 GPR158
srip8801 chr10 39094323 39094323 . unknown germline . no 248 .
srip8838 chr10 42797351 42797351 . unknown germline . no 248 .
srip8870 chr10 51583739 51583739 - unknown germline . no 248 NCOA4
srip9706 chr10 76230346 76230346 . unknown germline . no 248 ADK
srip9816 chr10 82972200 82972200 . unknown germline . no 248 .
srip11634 chr10 123704421 123704421 . unknown germline . no 248 LOC100130887
srip11966 chr10 131468408 131468408 - unknown germline . no 248 MGMT
srip12273 chr11 9906811 9906811 + unknown germline . no 248 SBF2
srip12554 chr11 15380252 15380252 + unknown germline . no 248 .
srip18349 chr11 121131527 121131527 . unknown germline . no 248 .
srip18521 chr11 123241795 123241795 + unknown germline . no 248 .
srip19271 chr11 134305645 134305645 - unknown germline . no 248 .
srip20753 chr12 28226420 28226420 - unknown germline . no 248 .
srip21010 chr12 33325798 33325798 - unknown germline . no 248 .
srip22228 chr12 43256979 43256979 - unknown germline . no 248 .
srip23138 chr12 66451382 66451382 - unknown germline . no 248 .
srip25409 chr12 116725149 116725149 + unknown germline . no 248 .
srip26082 chr12 118186932 118186932 + unknown germline . no 248 KSR2
srip29653 chr13 61734491 61734491 . unknown germline . no 248 .
srip30972 chr13 79259790 79259790 - unknown germline . no 248 .
srip35216 chr14 28301256 28301256 + unknown germline . no 248 .
srip35878 chr14 36674752 36674752 + unknown germline . no 248 .
srip36312 chr14 39875089 39875089 + unknown germline . no 248 FBXO33
srip37870 chr14 67419872 67419872 - unknown germline . no 248 GPHN
srip38636 chr14 86381803 86381803 - unknown germline . no 248 .
srip38768 chr14 86862664 86862664 - unknown germline . no 248 .
srip39357 chr15 33812908 33812908 + unknown germline . no 248 RYR3
srip39743 chr15 37707890 37707890 - unknown germline . no 248 .
srip42248 chr15 74168563 74168563 - unknown germline . no 248 TBC1D21
srip42260 chr15 77910870 77910870 . unknown germline . no 248 LINGO1
srip42520 chr15 83551628 83551628 - unknown germline . no 248 HOMER2
srip43262 chr15 100931152 100931152 - unknown germline . no 248 .
srip44075 chr16 17755305 17755305 - unknown germline . no 248 .
srip45225 chr16 33963595 33963595 - unknown germline . no 248 .
srip45515 chr16 33992437 33992437 . unknown germline . no 248 .
srip46318 chr16 71028016 71028016 + unknown germline . no 248 HYDIN
srip46525 chr17 4314989 4314989 - unknown germline . no 248 .
srip46826 chr17 15511186 15511186 + unknown germline . no 248 CDRT1
srip46834 chr17 17560694 17560694 - unknown germline . no 248 .
srip47713 chr17 32813627 32813627 . unknown germline . no 248 .
srip48364 chr17 68357404 68357404 + unknown germline . no 248 .
srip48959 chr18 15095249 15095249 - unknown germline . no 248 .
srip49446 chr18 28732910 28732910 - unknown germline . no 248 DSC1
srip50753 chr18 51762737 51762737 - unknown germline . no 248 .
srip52208 chr19 27737786 27737786 . unknown germline . no 248 .
srip52748 chr2 6798278 6798278 - unknown germline . no 248 .
srip52785 chr2 7050600 7050600 + unknown germline . no 248 .
srip53453 chr2 23191008 23191008 - unknown germline . no 248 .
srip53927 chr2 35879348 35879348 + unknown germline . no 248 .
srip54110 chr2 36381245 36381245 + unknown germline . no 248 .
srip54645 chr2 42051410 42051410 + unknown germline . no 248 .
srip56210 chr2 82098034 82098034 + unknown germline . no 248 .
srip56598 chr2 92117495 92117495 . unknown germline . no 248 SLC9B1P2;LOC100533687
srip59189 chr2 147020925 147020925 + unknown germline . no 248 .
srip59800 chr2 169554777 169554777 + unknown germline . no 248 CERS6
srip60791 chr2 191478707 191478707 - unknown germline . no 248 .
srip62211 chr2 226735312 226735312 + unknown germline . no 248 .
srip62481 chr2 234251722 234251722 - unknown germline . no 248 SAG
srip62671 chr2 238252207 238252207 + unknown germline . no 248 COL6A3
srip64018 chr20 25895497 25895497 - unknown germline . no 248 .
srip64133 chr20 29591437 29591437 + unknown germline . no 248 .
srip64771 chr20 41952105 41952105 - unknown germline . no 248 .
srip65848 chr21 19517305 19517305 - unknown germline . no 248 .
srip66291 chr21 23626198 23626198 - unknown germline . no 248 .
srip66936 chr21 29069180 29069180 + unknown germline . no 248 .
srip67145 chr22 17246062 17246062 + unknown germline . no 248 .
srip67859 chr22 22715595 22715595 + unknown germline . no 248 IGL@
srip68745 chr22 44324597 44324597 - unknown germline . no 248 PNPLA3
srip70736 chr3 24987866 24987866 - unknown germline . no 248 .
srip71070 chr3 26524450 26524450 - unknown germline . no 248 .
srip71910 chr3 38626071 38626071 + unknown germline . no 248 SCN5A
srip72711 chr3 55788574 55788574 + unknown germline . no 248 ERC2
srip73802 chr3 75101217 75101217 + unknown germline . no 248 .
srip77264 chr3 123590725 123590725 + unknown germline . no 248 MYLK
srip78657 chr3 151148549 151148549 - unknown germline . no 248 MED12L
srip80374 chr3 176091333 176091333 + unknown germline . no 248 .
srip80853 chr3 181192836 181192836 + unknown germline . no 248 .
srip82108 chr3 193354172 193354172 - unknown germline . no 248 OPA1
srip84683 chr4 47007785 47007785 - unknown germline . no 248 .
srip85068 chr4 49325463 49325463 . unknown germline . no 248 .
srip85383 chr4 57497060 57497060 - unknown germline . no 248 .
srip86164 chr4 66413931 66413931 + unknown germline . no 248 EPHA5
srip86351 chr4 66809075 66809075 . unknown germline . no 248 .
srip91593 chr4 132181654 132181654 - unknown germline . no 248 .
srip92824 chr4 138177331 138177331 + unknown germline . no 248 .
srip95418 chr4 190816412 190816412 . unknown germline . no 248 .
srip96150 chr5 10887250 10887250 . unknown germline . no 248 .
srip97751 chr5 33633341 33633341 - unknown germline . no 248 ADAMTS12
srip100733 chr5 89450775 89450775 + unknown germline . no 248 .
srip103540 chr5 132934092 132934092 + unknown germline . no 248 FSTL4
srip103604 chr5 135023720 135023720 . unknown germline . no 248 .
srip107508 chr6 13503042 13503042 + unknown germline . no 248 .
srip108174 chr6 39219886 39219886 . unknown germline . no 248 .
srip108709 chr6 46310298 46310298 + unknown germline . no 248 .
srip108811 chr6 51460483 51460483 . unknown germline . no 248 .
srip112063 chr6 91669514 91669514 . unknown germline . no 248 .
srip112686 chr6 102283763 102283763 - unknown germline . no 248 GRIK2
srip113797 chr6 142450104 142450104 - unknown germline . no 248 .
srip115686 chr6 162181262 162181262 + unknown germline . no 248 PARK2
srip116064 chr7 5787402 5787402 + unknown germline . no 248 RNF216
srip117461 chr7 52789459 52789459 + unknown germline . no 248 .
srip117935 chr7 61079426 61079426 . unknown germline . no 248 .
srip119673 chr7 84901723 84901723 - unknown germline . no 248 .
srip122277 chr7 110484750 110484750 + unknown germline . no 248 IMMP2L
srip122407 chr7 112789610 112789610 + unknown germline . no 248 .
srip123115 chr7 133149560 133149560 . unknown germline . no 248 EXOC4
srip123144 chr7 137225504 137225504 . unknown germline . no 248 DGKI
srip124077 chr8 4452901 4452901 - unknown germline . no 248 CSMD1
srip124399 chr8 5829282 5829282 - unknown germline . no 248 .
srip125053 chr8 22755917 22755917 . unknown germline . no 248 PEBP4
srip127442 chr8 72399228 72399228 - unknown germline . no 248 .
srip128029 chr8 83740686 83740686 . unknown germline . no 248 .
srip128271 chr8 87315042 87315042 + unknown germline . no 248 .
srip128835 chr8 111632616 111632616 + unknown germline . no 248 .
srip129132 chr8 115788572 115788572 - unknown germline . no 248 .
srip129407 chr8 115881775 115881775 + unknown germline . no 248 .
srip130139 chr8 131041232 131041232 + unknown germline . no 248 .
srip131117 chr9 6290491 6290491 + unknown germline . no 248 .
srip131372 chr9 7741401 7741401 + unknown germline . no 248 .
srip132358 chr9 30495884 30495884 - unknown germline . no 248 .
srip132570 chr9 30674459 30674459 - unknown germline . no 248 .
srip133392 chr9 32463891 32463891 - unknown germline . no 248 DDX58
srip133644 chr9 34904794 34904794 - unknown germline . no 248 .
srip134039 chr9 74904917 74904917 - unknown germline . no 248 .
srip134700 chr9 100675537 100675537 - unknown germline . no 248 C9orf156
srip135867 chr9 118083859 118083859 . unknown germline . no 248 DEC1
srip137256 chrX 54917144 54917144 + unknown germline . no 248 .
srip140305 chrX 111229565 111229565 - unknown germline . no 248 TRPC5
srip140470 chrX 111557754 111557754 - unknown germline . no 248 ZCCHC16
srip140817 chrX 119892837 119892837 - unknown germline . no 248 .
srip141068 chrX 122664864 122664864 - unknown germline . no 248 .